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CGM - Centre de Génétique Moléculaire

Les publications des chercheurs du CGM : 2002

 

ligne séparation   MàJ : 12/03/07

 

Publications 2002 : 95 références

 

- Adoutte, A. (2002) L'embryon et l'évolution. in L'Embryon chez l'Homme et l'Animal J. Martal (Ed.), INRA/INSERM,

- Albert, B. and Sellem, C. (2002) Dynamics of the mitochondrial genome during Podospora anserina aging. Curr Genet, 40 (6) 365-73.

- Audit, B., Vaillant, C., Arneodo, A., d'Aubenton-Carafa, Y. and Thermes, C. (2002) Long-range correlations between DNA bending sites : relation to the structure and dynamics of nucleosomes. J Mol Biol, 316 903-918.

- Balavoine, G., de Rosa, R. and Adoutte, A. (2002) Hox clusters and bilaterian phylogeny. Mol Phylogenet Evol. Review, 24 (3) 366-73.

- Barreau, C., Sellem, C., Silar, P., Sainsard-Chanet, A. and Turcq, B. (2002) A rapid and efficient method using chromoslots to assign any newly cloned DNA sequence to its cognate chromosome in the filamentous fungus Podospora anserina. FEMS Microbiology Letters, 216 55-60.

- Baudouin-Cornu, P. (2002) Composition élémentaire des protéines: métabolisme et analyse statistique. Thèse, Paris XI.

- Bernard, L., Babajko, S., Binoux, M. and Ricort, J. M. (2002) The amino-terminal region of insulin-like growth factor binding protein-3, (1-95)IGFBP-3, induces apoptosis of MCF-7 breast carcinoma cells. Biochem Biophys Res Commn, 293 55-60.

- Boireau, W., Bombard, S., Sari, M. and Pompon, D. (2002) Bioengineering and characterization of DNA- redox protein assemblies floating on supported membranes. Bioengineering and Biotechnology. Bioengineering and Biotechnology, 20 (77) 225-31.

- Branco, M., Monnerot, M., Ferrand, N. and Templeton , A. R. (2002) Postglacial dispersal of the European rabbit (Oryctolagus cuniculus) on the Iberian Peninsula reconstructed from nested clade a mismatch analyses of mitochondrial DNA genetic variation. Evolution, 56 (4) 792-803.

- Brendolise, C., Rouillard, J. M., Dufour, M. E. and Lacroute, F. (2002) Expression analysis of RNA14, a gene involved in mRNA 3' end maturation in yeast: characterization of the rna14-5 mutant strain Mol Gen. Genet . 267:515-25. Mol Gen Genet, 267 515-525.

- Breton, J., Boullais, C., Miokowski, C., Sebban, P., Baciou, L. and Nabedryk, E. (2002) Vibrational spectroscopy favors a unique QB binding site at the proximal position in wild-type reaction centers and in the Pro-L209Tyr mutant from Rhodobacter sphaeroides. Biochemistry, 41 (43) 12921-12926.

- Camerel, F., Gabriel, J. C., Batail, P., Davidson, P., Lemaire, B., Schmutz, M., Gulik-Krzywicki, T. and Bourgaux, C. (2002) Unprecedented single walled nanotubules based on weakly interacting covalent mineral polymers (Nb2PS10) in N-methyl formamide. Nano Letters, 2 403-407.

- Casselyn, M., Finet, S., Tardieu, A. and Delacroix, H. (2002) Time-resolved scattering investigations of brome mosaic virus microcrystals appearance. Acta Crystallogr D Biol Crystallogr, 58 (Pt 10 Pt 1) 1568-70.

- Cerchia, L., Hamm, J., Libri, D., Tavitian, B. and de Franciscis, V. (2002) Nucleic acid aptamers in cancer medicine. FEBS Lett, 528 12-16.

- De Chalendar, M. (2002) Etude des fonctions du facteur suppresseur de métastases Nm23/NDPK au cours du développement embryonnaire de Xenopus laevis. Thèse, Paris XI.

- De Gregorio, E., Han, S.-J. L., W.-J., Baek, M.-L., Osaki, T., Kawabata, S. I., Lee, B.-L., Iwanaga, S., Lemaitre, B. and Brey, P. T. (2002) An immune responsive serpin regulates the melanization cascade in Drosophila host defense. Dev Cell, 3 (4) 581-592.

- De Gregorio, E. and Lemaitre, B. (2002) The post genomic era opens. Nature, 419 496-497.

- De Gregorio, E., Spellman, P. T., Tzou, P. T., Rubin, G. M. and Lemaitre, B. (2002) The Toll and Imd pathways are the major regulators of the immune response in Drosophila adults. EMBO J, 21 (11) 2568-2579.

- De Reyer, D., Jeantet, A.-Y., Pilbout, S., Anglo, A. and Monnerot, M. (2002) Les lamelles protéiques des fils métalliques organiques de textiles médiévaux. Approche méthodologique de leur origine biologique. Studies in Conservation, The journal of the International institute for Conservation of Historic and Artistic Works, 47 (2) 122-134.

- De Rosa, R. (2002) Origine et évolution de la segmentation et de la croissance postérieure chez les Bilateria. Thèse, Paris XI.

- Demé, B., Dubois, M., Gulik-Krzywicki, T. and Zemb, T. (2002) Giant collective fluctuations of charged membranes at the lamellar-to-vesicle unbinding transition. Part 1: Characterisation of a new lipid morphology by SANS and Electron microscopy. Langmuir, 18 997-1004.

- Expert-Bezançon, A., Le Caer, J. P. and Marie, J. (2002) Heterogeneous nuclear ribonucleoprotein (hnRNP) K is a component of an intronic splicing enhancer complex that activates the splicing of the alternative exon 6A from chicken b-tropomyosin pre-mRNA. J Biol Chem, 277 16614-16623.

- Fernandez-Bellot, E., Guillemet, E., Ness, F., Baudin-Baillieu, A., Ripaud, L., Tuite, M. and Cullin, C. (2002) The [URE3] phenotype ; evidence for a soluble prion in yeast. EMBO Rep, 3 (1) 76-81.

- Fernet, C., Clark-Walker, G. and Claisse, M. (2002) The mitochondrial genome can be altered or lost without lethal effect in the petite-negative yeast Debaryomyces (Schwanniomyces) occidentalis. Curr Genet, 42 (2) 94-102.

- Flouriot, G., Brand, H., Seraphin, B. and Gannon, F. (2002) Natural trans-spliced mRNAs are generated from the human estrogen receptor-alpha (hER alpha) gene. J Biol Chem, 277 26244-26251.

- Förch, P., Puig, O., Martínez, C., Seraphin, B. and Valcárcel, J. (2002) The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5' splice sites. EMBO J, 21 6882-6892.

- Froissard, M., Kissmehl, R., Dedieu, J.-C., Gulik-Krzywicki, T., Plattner, H. and Cohen, J. (2002) N-Ethylmaleimide-sensitive factor ie required to organize funcional exocitotic microdomains in Paramecium. Genetics, 161 643-650.

- Galvani, A. (2002) Etude d'un phénomène d'extinction génique dépendant de l'homologie de séquence chez la paramécie. Thèse, Paris XI.

- Galvani, A. and Sperling, L. (2002) RNA interference by feeding in Paramecium. Trends Genet, 18 (1) 11-12.

- Gavin, A. C., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J. M., Michon, A. M., Cruciat, C. M., Remor, M., Hofert, C., Schelder, M., Brajenovic, M., Ruffner, H., Merino, A., Klein, K., Hudak, M., Dickson, D., Rudi, T., Gnau, V., Bauch, A., Bastuck, S., Huhse, B., Leutwein, C., Heurtier, M. A., Copley, R. R., Edelmann, A., Querfurth, E., Rybin, V., Drewes, G., Raida, M., Bouwmeester, T., Bork, P., Seraphin, B., Kuster, B., Neubauer, G. and Superti-Furga, G. (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature, 415 141-147.

- Geisberg, J., Moqtaderi, Z., Kuras, L. and Struhl, K. (2002) Mot1 associates with transcriptionally active promoters and inhibits association of NC2 in Saccharomyces cerevisiae. Mol Cell Biol, 22 8122-8134.

- Greenscer, L., Taly, A., Baciou, L., Maroti, P. and Sebban, P. (2002) Effect of binding of Cd2+ on bacterial reaction center mutants: proton- transfer uses interdependent pathways. Biochemistry, 41 9132-8.

- Grellier, P., Berrebi, D., Peuchmaur, M. and Babajko, S. (2002) The IGF system in neuroblastoma xenografts : focus on IGF-binding protein-6. J Endocrinol, 172 (3) 467-476.

- Grima, B., Lamouroux, A., Chelot, E., Papin, C., Limbourg-Bouchon, B. and Rouyer, F. (2002) The F-box protein SLIMB controls the levels of clock proteins PERIOD and TIMELESS. Nature, 420 178-182.

- Ho, T., Figueroa-Bossi, N., Wang, M., Uzzau S, Bossi, L. and Slauch, J. (2002) Identification of GtgE, a novel virulence factor encoded on the Gifsy-2 bacteriophage of Salmonella enterica serovar Typhimurium. J Bacteriol, 184 5234-5239.

- Khush, R. S., Cornwell, W. D., Uram, J. N. and Lemaitre, B. (2002) A Ubiquitin-Proteasome Pathway Represses the Drosophila Immune Deficiency Signaling Cascade. Curr Biol, 12 1728-1737.

- Khush, R. S., Leulier, F. and Lemaitre, B. (2002) Immunology. Pathogen surveillance- the flies have it. Science, 296 (5566) 273-275.

- Kissmehl, R., Froissard, M., Plattner, H., Momayezi, M. and Cohen, J. (2002) NSF regulates membrane traffic along multiple pathways in Paramecium. J Cell Sci, 115 (20) 3935-46.

- Kovermann, P., Truscott, K. N., Guiard, B., Rehlin, P., Sepuri, N., Muller, H., Jensen, R. and Pfanner, N. (2002) Tim22, the essential core of the mitochodrial protein insertion complex, forms a voltage-activated and signal-gated channel. Mol Cell, 9 (2) 363-373.

- Krzywicka-Racka, A. (2002) Genetic and molecular approaches of basal body duplication in Paramecium. Thèse, Paris XI.

- Kuras, L., Rouillon, A., Lee, T., Barbey, R., Tyers, M. and Thomas, D. (2002) Dual regulation of the Met4 transcription factor by ubiquitin-dependent degradation and inhibition of promoter recrutment. Mol Cell, 10 (1) 69-80.

- Lartillot, N., Le Gouar, M. and Adoutte, A. (2002) Expression patterns of fork head and goosecoid homologues in the mollusc Patella vulgata supports the ancestry of the anterior mesendoderm across Bilateria. Dev Genes Evol, 212 551-561.

- Lartillot, N., Lespinet, O., Vervoort, M. and Adoutte, A. (2002) Expression pattern of Brachyury in the mollusc Patella vulgata suggests a conserved role in the establishment of the A-P axis in Bilateria. Development, 129 1411-1421.

- Le Hir, H., Charlet-Berguerant, N., de Franciscis, V. and Thermes, C. (2002) 5' -end RET splicing : Absence of variants in normal tissues and intron retention in Pheochromocytomas. Oncology, 63 84-91.

- Ledent, V., Paquet, O. and Vervoort, M. (2002) Phylogenetic analysis of the human basic helix-loop-helix proteins. Genome Biol, 3 (6)

- Lespinet, O., Nederbragt, A. J., Cassan, M., Dictus, W. J. A. G., van Loon, A. E. and Adoutte, A. (2002) Characterization of two snail genes in the gastropod mollusc Patella vulgata. Implications for understanding the ancestral function of the snail-related genes in Bilateria. Dev Genes Evol, 212 186-195.

- Leulier, F., Vidal, S. D., Saigo, K., Ueda, R. and Lemaitre, B. (2002) Inducible expression of double-stranded RNA reveals a role for dFADD in the regulation of the antibacterial response in Drosophila adults. Curr Biol, 12 (12) 996-1000.

- Libri, D., Dower, K., Boulay, J., Thomsen, R., Rosbash, M. and Jensen, T. H. (2002) Interactions between mRNA export commitment, 3'-end quality control, and nuclear degradation. Mol Cel Biol, 22 8254-8266.

- Libri, D., Ducongé, F., Levy, L. and Vinauger, M. (2002) A role of the y -U mismatch in the recognition of the 5' splice site of yeast introns by the U1 small nuclear ribonucleoprotein particle. J Biol Chem, 277 18173-18181.

- Licatalosi, D., Geiger, G., Minet, M., Schroeder, S., Cilli, K., McNeil, J. and Bentley, D. (2002) Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II. Mol Cell, 9 1101-1111.

- Lodi, T., Fontanesi, F. and Guiard, B. (2002) Co-ordinate regulation of lactate metabolism genes in yeast: the role of the lactate permease gene JEN1. Mol Gen Genomics, 266 (5) 838-847.

- Marcillière, S. (2002) Caractérisation génétique et moléculaire d'un nouveau gène impliqué dans la régulation de decapentaplegic chez Drosophila melanogaster. Thèse, Paris XI.

- Mencia, M., Moqtaderi, Z., Geisberg, J. V., Kuras, L. and Struhl., K. (2002) Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast. Mol Cell, 9 823-833.

- Mohamed, I., Klauke, N., Hentschel, J., Cohen, J. and Plattner, H. (2002) Functional and fluorochrome analysis of an exocytotic mutant yields evidence of store-operated Ca 2+ influx in Paramecium. J Membrane Biol, 187 1-14.

- Mucchielli-Giorgi, M. H., Hazout, S. and Tuffery, P. (2002) Predicting the disulfide bonding state of cysteines using protein descriptor. Proteins, 15,46 (3) 243-9.

- Mucchielli-Giorgi, M. H. and Tuffery, P. (2002) An analysis of the local environment influence. Comput Chem, 26 (445-452)

- Nederbragt, A., Lespinet, O., van Wageningen, S., van Loon, A., Adoutte, A. and Dictus, W. (2002) A lophotrochozoan twist gene is expressed in the ectomesoderm of the gastropod mollusk Patella vulgata. Evol Development, 4 (5) 334-343.

- Niculita, H. (2002) Évolution moléculaire du gène homéotique abdominal-A et diversité morphologique de l'abdomen chez les fourmis. Thèse, Université P. et M. Curie.

- Ouchane, S., Agalidis, I. and Astier, C. (2002) Natural resistance to inhibitors of the ubiquinol cytochrome c oxidoreductase of Rubrivivax gelatinosus: sequence and functional analysis of the cytochrome bc(1) complex. J Bacteriol, 184 (14) 3815-22.

- Panozzo, C., Nawara, M., Suski, C., Kucharczyka, R., Skoneczny, M., Bécam, A., Rytka, J. and Herbert, C. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett, 517 (97-102).

- Pflieger, D., Le Caer, J. P., Lemaire, C., Bernard, B. A. and Dujardin, G. (2002) Towards the systematic identification of mitochondrial proteins by LC-MS/MS. Annal Chem, 74 (10) 2400-406.

- Pinta, V., Picaud, M., Reiss-Husson, F. and Astier, C. (2002) Rubrivivax gelatinosus acsF (previously orf358) codes for a conserved, binuclear-iron-cluster containg protein involved in aerobic cyclization of Mg-protoporphyrin IX monomethylester. J Bacteriol, 184 746-753.

- Pompon, D. (2002) L’évolution moléculaire dirigée des enzymes. L’actualité chimique, 8 22-26.

- Prud'homme, B., Lartillot, N., Balavoine, G., Adoutte, A. and Vervoort, M. (2002) Phylogenetic analysis of the Wnt gene family: insights from lophotrochozoan members. Curr Biol, 12 1395-1400.

- Queney, G., Gautier, A., Lopez, M., Bolet, G. and Monnerot, M. (2002) Caracterización genética de la raza gigante de España. El Arca, 5 (1)

- Queney, G., Vachot, A. M., Brun, J.-M., Dennebouy, N., Mulsant, P. and Monnerot, M. (2002) Different levels of human intervention in domestic rabbit : effects on genetic diversity. J Heredity, 93 205-209.

- Reichert, V. L., Le Hir, H., Jurica, M. S. and Moore, M. J. (2002) 5' exon interactions within the human spliceosome establish a framework for exon junction complex structure and assembly. Genes Dev, 16 (21) 2778-2791.

- Remillieux-Leschelle, N. (2002) Contrôle de l'identité cellulaire au cours du développement de la Drosophile : Etude du gène multi sex combs. Thèse, Paris XI.

- Remillieux-Leschelle, N., Santamaria, P. and Randsholt, N. B. (2002) Regulation of larval hematopoiesis in Drosophila melanogaster: A role for the multi sex combs gene. Genetics, 162 (3) 1259-1274.

- Rossignol, M., Moulin, L. and Boccard, F. (2002) Phage HK022-based integrative vectors for the insertion of genes in the chromosome of multiply marked Escherichia coli strains. FEMS Microbiol. Lett., 213 45-49.

- Rottgers, K., Zufall, N., Guiard, B. and Voos, W. (2002) The ClpB homolog Hsp78 is required for the efficient degradation of proteins in the mitochondrial matrix. J Biol Chem, 277 (48) 45829-45837.

- Rouillard, J., Herbert, C. and Zuker, M. (2002) OligoArray: genome-scale oligonucleotide design for microarrays. Bioinformatics, 18 486-7.

- Royou, A., Sullivan, W. and Karess, R. (2002) Cortical recruitment of nonmuscle myosin II in early syncytial Drosophila embryos: its role in nuclear axial expansion and its regulation by Cdc2 activity. J Cell Biol, 158 (1) 127-37.

- Saguez, C. (2002) Dynamisme d'assemblage de la snRNP U4/U6. Etude des facteurs mis en jeu. Thèse de doctorat, Université Paris 7.

- Saint-Georges, Y., Bonnefoy, N., Di Rago, J., Chiron, S. and Dujardin, G. (2002) A pathogenic cytochrome b mutation reveals new interactions between subunits of the mitochondrial bc1 complex. J Biol Chem, 277 (49397-49402).

- Seraphin, B. (2002) Identification of transiently interacting proteins and of stable protein complexes. in Adv Protein Chemistry, 61 99-117.

- Seurin, D., Lassare, C., Bienvenu, G. and Babajko, S. (2002) Insulin-like growth factor binding protein-6 inhibits neuroblastoma cell proliferation and tumour development. Eur J Cancer, 38 2058.

- Sperling, L., Dessen, P., Zagulski, M., Pearlman, R. E., Migdalski, A., Gromadka, R., Froissard, M., Keller, A. M. and Cohen, J. (2002) Random Sequencing of Paramecium somatic DNA. Eukaryot Cell, 1 (3) 341-352.

- Taly, A., Baciou, L. and Sebban, P. (2002) The DMPC lipid phase transition influences differently the first and the second electron transfer reactions in bacterial reaction centers. FEBS Lett, 532 (1-2) 91-96.

- Tandori, J., Maroti, P., Alexov, E., Sebban, P. and Baciou, L. (2002) Key role of proline L209 in connecting the distant quinone pockets in the reaction center of Rhodobacter sphaeroides. Proc Natl Acad Sci USA, 99 6702-6.

- Tandori, J., Miksovska, M., Valerio-Lepinec, M., Schiffer, P., Maroti, P., Hanson, D. and Sebban, P. (2002) Proton uptake of Rhodobacter capsulatus reaction center mutants modified in the primary quinone environment. Photochem Photobiol, 75 (2) 126-134.

- Taulier, N., Waks, M., Gulik-Krzywicki, T. and Urbach, W. (2002) Interactions between transmembrane proteins embedded in a lamellar phase, stabilized by steric interactions. Europhysics Letters, 59 142-148.

- Tosi-Couture, E., Delacroix, H., Mignot, T., Mesnage, S., Chami, M., Fouet, A. and Mosser, G. (2002) Structural analysis and evidence for the dynamics emergence of Bacillus anthracis S-layer networks. J Bacteriol, 184 (23) 6448-6456.

- Truscott, K. N., Wiedemann, N., Rehling, P., Müller, H., Meisinger, C., Pfanner, N. and Guiard, B. (2002) Mitochondrial import of the ADP/ATP carrier: the essential TIM complex of the intermembrane space is required for precursor release from the TOM complex. Mol Cel Biol, 22 (22) 7780-7789.

- Tzou, P. (2002) Expression and Functions of Antimicrobial Peptides During Drosophila Immune Response. Paris XI.

- Tzou, P., De Gregorio, E. and Lemaitre, B. (2002) How Drosophila combats microbial infection: a model to study innate immunity and host-pathogen interactions. Curr Op Microbiol, 5 (1) 102-110.

- Tzou, P., Meister, M. and Lemaitre, B. (2002) Methods for studying infection and immunity in Drosophila. in Methods in Microbiology 31, (Ed.),

- Tzou, P., Reichhart, J. M. and Lemaitre, B. (2002) Constitutive expression of a single antimicrobial peptide restores wild-type resistance to infection in immuno-deficient Drosophila mutants. Proc Natl Acad Sci USA, 99 (4) 2152-2157.

- Urban, P. (2002) Souplesse de la spécificité de substrat des cytochromes P450. HDR, Université Paris XI.

- Uzzau, S., Bossi, L. and Figueroa-Bossi, N. (2002) Differential accumulation of Salmonella [Cu, Zn] superoxide dismutases SodCI and SodCII in intracellular bacteria: correlation with their relative contribution to pathogenicity. Mol Microbiol, 46 147-156.

- van Dijk, E., Cougot, N., Meyer, S., Babajko, S., Wahle, E. and Seraphin, B. (2002) Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures. EMBO J, 21 (24) 6915-6924.

- Vervoort, M. (2002) Functional evolution of Hox proteins in arthropods. BioEssays, 24 775-779.

- Westermarck, J., Weiss, C., Saffrich, R., Kast, J., Musti, A. M., Wessely, M., Ansorge, W., Seraphin, B., Wilm, M., Valdez, B. C. and Bohmann, D. (2002) The DEXD/H-box RNA helicase RHII/Gu is a co-factor for c-Jun-activated transcription. EMBO J, 21 451-460.

- Xu, Q., Baciou, L., Sebban, P. and Gunner, M. R. (2002) Exploring the energy landscape for q(a)(-) to q(b) electron transfer in bacterial photosynthetic reaction centers: effect of substrate position and tail length on the conformational gating step. Biochemistry, 41 10021-5.

 

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